There's no evidence that any events were altered by the reboot. It just restored things to the way they were at the time of "The Pandorica Opens".

It's conceivable that the cracks themselves could have erased the Time War, in which case Gallifrey would be restored, and the reboot wouldn't affect that. But it's very unlikely—the Doctor would surely notice if Gallifrey were back, given that he can sense the presence of a single Time Lord anywhere in space and time.

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